Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGCCACCGCGGCGCGGA
((((.((((((((.(((((((&))))).)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020925
GeneSymbolCACHD1
Binding site474,496
Score0.923
Seed0
Au0.382
Energy-25.1
Binding len22
Me-8.913
Phylopstem0.490125075
Phylopflank0.4593150462500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure