Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAACCCCAGCTGCGAG
(((((((((.((((....(((&)))..)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020925
GeneSymbolCACHD1
Binding site3587,3607
Score0.923
Seed1
Au0.412
Energy-23.1
Binding len20
Me-6.149
Phylopstem5.865196888888888
Phylopflank4.866490787375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure