Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGA
.((((((((.............&)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020927
GeneSymbolVAT1L
Binding site419,428
Score0.846
Seed1
Au0.515
Energy-14.9
Binding len9
Me-14.322
Phylopstem5.12085875
Phylopflank5.238097651250001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure