Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCCACCGCAGCCACCGCAGC
((((.((((((((.((..(((&)))...)).))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020927
GeneSymbolVAT1L
Binding site67,93
Score0.846
Seed0
Au0.191
Energy-21.5
Binding len26
Me-8.913
Phylopstem1.4766294875
Phylopflank1.73866569625
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure