Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGTGACCTGCAGCTGTGGA
((((((((((((((...((((&))))....)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020928
GeneSymbolZSWIM6
Binding site786,810
Score0.808
Seed1
Au0.559
Energy-22.5
Binding len24
Me-4.906
Phylopstem6.058842733333333
Phylopflank5.735075908475
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure