Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGAGAACTGGCATAGCTGCAGA
((((((((((((((.(..((.&))..).)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020935
GeneSymbolUSP37
Binding site189,213
Score0.923
Seed1
Au0.515
Energy-20.4
Binding len24
Me-4.673
Phylopstem0.9942147529411764
Phylopflank1.1991070450000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure