Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGGGACATCTGTGTGCCTGGG
.((.((((((((((((......&.)))).)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020939
GeneSymbolCPNE5
Binding site1943,1966
Score0.923
Seed0
Au0.338
Energy-19.0
Binding len18
Me-6.825
Phylopstem4.240629200000001
Phylopflank4.967094867499999
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure