Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGCACTGTGCAGCTGTAC
.((((((((((..(((.((((&))))..)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020939
GeneSymbolCPNE5
Binding site1331,1354
Score0.846
Seed1
Au0.324
Energy-22.3
Binding len23
Me-8.429
Phylopstem0.25890953
Phylopflank-0.3749513025000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure