Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGATGCTGTTAGTAAGTTTGCCAGAGCCTGCGGCTGCAAA
((((((((((((((.(..(((&.)))).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020940
GeneSymbolFHIP2A
Binding site1146,1189
Score0.846
Seed1
Au0.485
Energy-25.0
Binding len22
Me-4.673
Phylopstem5.104543653333334
Phylopflank4.64815599125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure