Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACACAGCTGCAGCTCTTCAAGCAGT
((((((((((((((((..(((&)))..))))))))))))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020946
GeneSymbolDENND1A
Binding site1292,1320
Score0.846
Seed1
Au0.544
Energy-24.5
Binding len28
Me-3.938
Phylopstem-0.3562525863636364
Phylopflank-0.41898381
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure