Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAGGACGTCTGTGCCGAGCCCTGAGCAGCCGCAGCCGTAT
.(((.(((((((((((.(((.&.)))..))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020946
GeneSymbolDENND1A
Binding site1767,1811
Score0.923
Seed0
Au0.338
Energy-27.4
Binding len22
Me-7.912
Phylopstem1.9320680000000001
Phylopflank1.2332681350000003
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure