Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGAGCTGGCGGCTGTAC
.(((((((((((((.(.((((&)))).).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020954
GeneSymbolRNF213
Binding site2162,2184
Score0.923
Seed1
Au0.441
Energy-22.8
Binding len22
Me-4.529
Phylopstem-0.22372398571428595
Phylopflank-0.37093057875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure