Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGACCGCGGCTCCCCCGCGCTGAGCAGA
((((((((((((((....(((&)))...))))))))))............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020957
GeneSymbolPCDHB16
Binding site1769,1802
Score0.808
Seed1
Au0.25
Energy-21.2
Binding len33
Me-4.906
Phylopstem0.8708970546153846
Phylopflank-0.09997206075000004
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end4
PositionCDS
2D Structure