Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCAGG
((((((((((((((((.((((&))))))))))..................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020971
GeneSymbolSPTBN4
Binding site5967,6006
Score0.846
Seed1
Au0.309
Energy-25.6
Binding len39
Me-3.938
Phylopstem3.582894267647059
Phylopflank2.6435614862499994
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure