Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCGCAAAGCGGCTGCAGC
((((((((((..(((((((((&)))))..)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020971
GeneSymbolSPTBN4
Binding site6593,6616
Score0.846
Seed1
Au0.368
Energy-24.6
Binding len23
Me-10.109
Phylopstem1.6594359
Phylopflank4.125459525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure