Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTGGATTTTCAATGGCAGTTGCAAT
((((((((((.((((.(((((&.))))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020980
GeneSymbolAQP9
Binding site366,394
Score1.0
Seed1
Au0.544
Energy-22.9
Binding len22
Me-6.995
Phylopstem1.9520792999999999
Phylopflank2.908704675000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure