Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGTGGGGGCTGCAAC
((((((((.(.(....(((((&)))))..).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020980
GeneSymbolAQP9
Binding site521,541
Score0.885
Seed1
Au0.471
Energy-19.1
Binding len20
Me-10.933
Phylopstem2.4855036499999996
Phylopflank3.31176381125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure