Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTCCTGTTTGTATGTTTTGACAGTTGTGTGCTGGGC
.(((((((((((((((......&.))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020981
GeneSymbolB3GALT1
Binding site854,894
Score0.846
Seed1
Au0.515
Energy-19.5
Binding len18
Me-3.793
Phylopstem5.20823423125
Phylopflank3.7149749187500007
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure