Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACGCAGCCGCAAAGAATGGTTATACGCCACTGCACATCGCTGCC
..((((((((((((((.((((&))))...)))))))))...........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020987
GeneSymbolANK3
Binding site2205,2254
Score0.846
Seed1
Au0.5
Energy-23.5
Binding len49
Me-4.957
Phylopstem4.1122575609756105
Phylopflank4.573791
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure