Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCGGCAATGGCTGCAGG
(((((((((..(((((.((((&)))).)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020991
GeneSymbolCSH2
Binding site52,74
Score0.949
Seed1
Au0.353
Energy-22.5
Binding len22
Me-8.005
Phylopstem-0.06834465555555555
Phylopflank0.313245808
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure