Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCTGCAGCTT
....(((((((((....((((&))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020992
GeneSymbolPDLIM1
Binding site1109,1125
Score0.923
Seed0
Au0.456
Energy-18.5
Binding len16
Me-11.372
Phylopstem2.0778123999999996
Phylopflank4.407562615
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure