Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAACGTGAGCTGCGCTGCAGG
(((((((.((((((((.((((&))))...)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020999
GeneSymbolNEUROG3
Binding site1522,1548
Score0.923
Seed1
Au0.333
Energy-21.0
Binding len26
Me-6.251
Phylopstem-0.461027
Phylopflank-0.05394511068181823
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure