Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCTCCATACCGCAGCGTGCT
..(((((((((((.((((((.&)))))).....)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365907
GeneSymbolPAPLN
Binding site1372,1396
Score0.846
Seed1
Au0.397
Energy-22.4
Binding len24
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure