Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTCAACCTGGTTGTAAT
(((((((((.(((((((((((&)))))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021007
GeneSymbolSCN2A
Binding site2380,2402
Score1.0
Seed1
Au0.544
Energy-21.9
Binding len22
Me-5.18
Phylopstem3.7173981391666664
Phylopflank5.098996308374999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure