Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTCCTGGCTGCT
..(((((((.((..((((((.&))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021012
GeneSymbolKCNJ12
Binding site1007,1025
Score0.846
Seed1
Au0.397
Energy-21.7
Binding len18
Me-8.345
Phylopstem5.210192
Phylopflank4.74598891125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure