Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGAGAGCCAGCCAGCAGCATTAAAGCTCTACTGTGTGGCAGGG
.((((.((((((..(((((...&.))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021015
GeneSymbolSSX5
Binding site221,266
Score0.923
Seed0
Au0.456
Energy-21.1
Binding len18
Me-7.84
Phylopstem-0.029924000000000023
Phylopflank0.05959515749999998
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure