Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGTGCCAAGAGTTCGATGT
((((...(((((((((((((.&)))))))))))))..)))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_021015
GeneSymbolSSX5
Binding site929,949
Score0.846
Seed0
Au0.632
Energy-21.1
Binding len20
Me-11.501
Phylopstem-0.9681453538461539
Phylopflank-0.72408016625
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure