Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGGCTGGCTTGCAGAAAAGGTGCCAGGG
.((((((((....(((((....&.)))))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021021
GeneSymbolSNTB1
Binding site1176,1208
Score0.923
Seed1
Au0.471
Energy-18.6
Binding len21
Me-12.497
Phylopstem4.429461249999999
Phylopflank1.99432305875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure