Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATACTTTCCAGTAGCTGTAGG
((((((((((((..(((.(((&))).)))...)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021023
GeneSymbolCFHR3
Binding site166,190
Score0.846
Seed1
Au0.632
Energy-20.7
Binding len24
Me-6.084
Phylopstem-0.12647176623076925
Phylopflank-0.3644986272875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure