Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCTGCTTGCTCTCAGCTGCAGT
(((((((((.((..(((((..&.))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021027
GeneSymbolUGT1A9
Binding site5,31
Score0.923
Seed1
Au0.433
Energy-20.2
Binding len19
Me-7.326
Phylopstem-0.5503828888888889
Phylopflank-0.11804169249999993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure