Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATGAGGCAGTTTGTCATTATGCAAT
((((((((((..(((((((((&))))))))).))))).........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021029
GeneSymbolRPL36A
Binding site576,606
Score0.923
Seed1
Au0.588
Energy-18.9
Binding len30
Me-10.109
Phylopstem-0.04209726842105264
Phylopflank0.005688863750000011
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure