Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAAAGCCGCAGCCGGCGC
.(((.(((((((((...(((.&)))....)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021032
GeneSymbolFGF12
Binding site678,700
Score1.0
Seed0
Au0.324
Energy-23.5
Binding len22
Me-8.881
Phylopstem1.9019684444444447
Phylopflank1.7364387075000005
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure