Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAACCGACCCCCATGCTATGTGCCTTGTACTAAGCTGCT
..(((((((((((((((.(((&))).)))))))).)........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021035
GeneSymbolZNFX1
Binding site4671,4716
Score0.846
Seed1
Au0.456
Energy-22.0
Binding len45
Me-4.957
Phylopstem1.6103409799999997
Phylopflank2.5122908924999994
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure