Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACCAGCAGCTGCGC
.((((((((((((.((.....&)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021035
GeneSymbolZNFX1
Binding site3179,3196
Score0.923
Seed1
Au0.426
Energy-21.4
Binding len17
Me-4.65
Phylopstem2.4242050692307693
Phylopflank4.123072523749999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure