Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCTGCTGCAGCTGCT
..(((((((((((.((.((((&))))...)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021038
GeneSymbolMBNL1
Binding site1447,1469
Score0.846
Seed1
Au0.471
Energy-26.5
Binding len22
Me-5.814
Phylopstem5.003183363636363
Phylopflank4.75289992975
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure