Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCAATTGCAGCA
.....((((((((((..((((&))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021044
GeneSymbolDHH
Binding site4221,4238
Score0.923
Seed0
Au0.544
Energy-20.4
Binding len17
Me-13.899
Phylopstem3.0006627000000003
Phylopflank2.85518538125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure