Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGGGCTGCTGTGGCTGCT
..(((((((((((.((..(((&)))....)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021046
GeneSymbolKRTAP5-8
Binding site28,50
Score0.846
Seed1
Au0.324
Energy-21.7
Binding len22
Me-5.814
Phylopstem0.773090909090909
Phylopflank0.15815714285714289
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure