Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTATAGCTGCCAGCA
.....((((((((((((((.(&).))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021071
GeneSymbolART4
Binding site1817,1835
Score0.923
Seed0
Au0.471
Energy-18.8
Binding len18
Me-13.666
Phylopstem0.4238343
Phylopflank-0.048735364499999996
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure