Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTTACAAGACAGCCAGGG
.((((((......(((((((((&))))))))).....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021072
GeneSymbolHCN1
Binding site1023,1044
Score0.923
Seed1
Au0.618
Energy-17.7
Binding len21
Me-15.867
Phylopstem0.45063688888888886
Phylopflank0.12985940125
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure