Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGTGGGAGATGGCCGCCCAGCTGCGAG
((((((((((((((((.....&.))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021076
GeneSymbolNEFH
Binding site1164,1195
Score0.923
Seed1
Au0.441
Energy-22.5
Binding len20
Me-3.938
Phylopstem6.7682555
Phylopflank4.9362037525
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure