Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCGCCCCGCACCCCAAATCCAGTACAGGAGGCTGCT
..(((((((((((((..((((&))))))))))).........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021077
GeneSymbolNMB
Binding site348,391
Score0.846
Seed1
Au0.456
Energy-22.2
Binding len43
Me-5.19
Phylopstem1.0882639297368413
Phylopflank0.9036348148749999
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end6
PositionCDS
2D Structure