Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAGACCATGACTGAGCGGCTGCGAA
((((((((((((((...((((&))))...))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021078
GeneSymbolKAT2A
Binding site2383,2413
Score0.846
Seed1
Au0.426
Energy-24.6
Binding len30
Me-4.906
Phylopstem4.524610195454545
Phylopflank5.8524263525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure