Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGTGAGCTGTGCCGCAGTTGTGAG
(((((((((((((....((((&))))...........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021078
GeneSymbolKAT2A
Binding site487,516
Score0.923
Seed1
Au0.397
Energy-22.1
Binding len29
Me-5.763
Phylopstem-1.0695374692307693
Phylopflank1.2866409400000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure