Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGACAACTGCATGGAGCTGCAC
.((((((((((((((((((((&)))))..)))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021079
GeneSymbolNMT1
Binding site4432,4459
Score1.0
Seed1
Au0.456
Energy-26.0
Binding len27
Me-3.793
Phylopstem0.03954629615384617
Phylopflank0.11759244125000012
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure