Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGAAGTGGATGATGGAGGCAGCTAGCCGTAGCTGCT
..(((((((((((((......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021089
GeneSymbolZNF8
Binding site6909,6949
Score0.923
Seed1
Au0.485
Energy-23.8
Binding len15
Me-5.19
Phylopstem0.011543476923076935
Phylopflank-0.18494185125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure