Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCTCACTGTGCCAGGC
.(((((((((...((..(((..&)))..)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021095
GeneSymbolSLC5A6
Binding site2387,2405
Score0.923
Seed1
Au0.382
Energy-17.7
Binding len18
Me-11.487
Phylopstem5.404030333333334
Phylopflank4.080322862499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure