Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTACTTTGTGATGGATCTCCTGAAGGGCCTGCCAGGCCTGCCAGGG
.(((((((..(...((((....&.))))...)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021095
GeneSymbolSLC5A6
Binding site1468,1515
Score0.846
Seed1
Au0.368
Energy-18.0
Binding len19
Me-11.585
Phylopstem5.615560285714286
Phylopflank4.492632325000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure