Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTGAGACTGTGGCTGGAAG
((.(((((((((((....(((&)))....))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021095
GeneSymbolSLC5A6
Binding site349,371
Score0.846
Seed0
Au0.412
Energy-19.5
Binding len22
Me-6.464
Phylopstem0.7303468
Phylopflank0.471437203375
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end4
Position5UTR
2D Structure