Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTCTGCAGAGGCTGCTGGGTT
((((((((..(..((((((.((&)).))))))..)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021097
GeneSymbolSLC8A1
Binding site13100,13123
Score0.846
Seed1
Au0.515
Energy-18.9
Binding len23
Me-10.872
Phylopstem0.39949563750000006
Phylopflank0.10119900600000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure