Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATGACTGGAGCTGGCAAC
((((((((.(((((((.((((&)))).))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021097
GeneSymbolSLC8A1
Binding site1319,1342
Score0.923
Seed1
Au0.485
Energy-23.2
Binding len23
Me-4.994
Phylopstem0.120558
Phylopflank-0.21384341625
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure